LOC_Os01g17000 (Os01g0277500)


Aliases : Os01g0277500

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 2 (CDF2)


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g17000
Cluster HCCA cluster: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01021085001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01021086001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01038591001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc02g077960.2.1 Solyc02g077960.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc02g078620.1.1 Solyc02g078620.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc02g090220.3.1 Solyc02g090220.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.01 Gene family
Solyc03g121400.1.1 Solyc03g121400.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc08g082910.2.1 Solyc08g082910.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d032999 GRMZM2G138455 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 112 168
No external refs found!