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  5. AT5G45230

AT5G45230


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0013887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013887_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G45230
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT4G12010 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G19510 No alias Disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from all 47 species
AT5G17880 CSA1 disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from all 47 species
AT5G44870 LAZ5 Disease resistance protein (TIR-NBS-LRR class) family 0.07 OrthoFinder output from all 47 species
AT5G45060 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT5G45200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006952 defense response ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0009866 induced systemic resistance, ethylene mediated signaling pathway IEP HCCA
BP GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 220 453
IPR011713 Leu-rich_rpt_3 636 655
IPR000157 TIR_dom 12 190
No external refs found!