1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G45200

AT5G45200


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0013887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013887_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G45200

Target Alias Description ECC score Gene Family Method Actions
AT2G17060 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT3G51570 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT4G12010 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G19510 No alias Disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
AT4G19530 No alias disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G45060 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G45230 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0008422 beta-glucosidase activity IEP HCCA
MF GO:0008825 cyclopropane-fatty-acyl-phospholipid synthase activity IEP HCCA
BP GO:0009804 coumarin metabolic process IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 219 448
IPR000157 TIR_dom 19 179
IPR011713 Leu-rich_rpt_3 640 659
No external refs found!