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Aliases : LACS6, ATLACS6
Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none
Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g31368 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G49430 | LRD2, LACS2 | long-chain acyl-CoA synthetase 2 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G47240 | CER8, LACS1 | AMP-dependent synthetase and ligase family protein | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene16148.t1 | ATLACS7, LACS7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010150 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g500715 | CER8, LACS1 | Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01017932001 | LACS6, ATLACS6 | Lipid metabolism.lipid degradation.fatty acid... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21648 | LACS6, ATLACS6 | peroxisomal long-chain acyl-CoA synthetase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g48910.2 | LACS4, LOC_Os01g48910 | Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03105 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g25755 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g075770.3.1 | LACS6, ATLACS6,... | peroxisomal long-chain acyl-CoA synthetase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e024608_P001 | LRD2, LACS2,... | Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e040332_P001 | CER8, LACS1,... | Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| CC | GO:0070939 | Dsl1/NZR complex | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000873 | AMP-dep_Synth/Lig_com | 107 | 548 |
| No external refs found! |