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  5. AT5G42290

AT5G42290


Description : transcription activator-related


Gene families : OG0011300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G42290
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0027.g023560 No alias not classified & original description: CDS=1-438 0.1 OrthoFinder output from all 47 species
Ceric.31G070000.1 Ceric.31G070000 not classified & original description: pacid=50574404... 0.05 OrthoFinder output from all 47 species
Dac_g14263 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os03g04080.1 LOC_Os03g04080 no hits & (original description: none) 0.21 OrthoFinder output from all 47 species
MA_548946g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038935_P001 Zm00001e038935 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
MF GO:0003845 11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity IEP HCCA
MF GO:0004303 estradiol 17-beta-dehydrogenase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006108 malate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
CC GO:0042807 central vacuole IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0070524 11-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP HCCA
MF GO:0072555 17-beta-ketosteroid reductase activity IEP HCCA
MF GO:0072582 17-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!