1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G41980

AT5G41980


Description : CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0009233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G41980

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000254001 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006470 protein dephosphorylation IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 147 299
No external refs found!