AT5G41610 (ATCHX18, CHX18)

Aliases : ATCHX18, CHX18

Description : cation/H+ exchanger 18

Gene families : OG0000230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000230_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G41610

Target	Alias	Description	ECC score	Gene Family Method
AT5G01690	ATCHX27, CHX27	cation/H+ exchanger 27	0.04	OrthoFinder output from all 47 species
AT5G37060	CHX24, ATCHX24	cation/H+ exchanger 24	0.03	OrthoFinder output from all 47 species
Adi_g036265	ATCHX18, CHX18	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g055098	ATCHX18, CHX18	proton:monovalent cation antiporter *(CHX) & original...	0.02	OrthoFinder output from all 47 species
Adi_g110725	ATCHX20, CHX20	proton:monovalent cation antiporter *(CHX) & original...	0.05	OrthoFinder output from all 47 species
Aev_g11345	ATCHX18, CHX18	proton:monovalent cation antiporter *(CHX) & original...	0.02	OrthoFinder output from all 47 species
Ala_g33507	ATCHX20, CHX20	proton:monovalent cation antiporter *(CHX) & original...	0.02	OrthoFinder output from all 47 species
Als_g40176	ATCHX19, CHX19	proton:monovalent cation antiporter *(CHX) & original...	0.05	OrthoFinder output from all 47 species
Aob_g24905	ATCHX18, CHX18	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g09909	ATCHX19, CHX19	proton:monovalent cation antiporter *(CHX) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene58129.t1	ATCHX18, CHX18,...	proton:monovalent cation antiporter *(CHX) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene60902.t1	ATCHX19, CHX19,...	proton:monovalent cation antiporter *(CHX) & original...	0.03	OrthoFinder output from all 47 species
Ceric.20G020100.1	ATCHX19, CHX19,...	proton:monovalent cation antiporter *(CHX) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g12561	ATCHX19, CHX19	proton:monovalent cation antiporter *(CHX) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g07019	ATCHX19, CHX19	proton:monovalent cation antiporter *(CHX) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01034209001	ATCHX20, CHX20	Solute transport.carrier-mediated transport.CPA...	0.03	OrthoFinder output from all 47 species
GSVIVT01034211001	ATCHX20, CHX20	Solute transport.carrier-mediated transport.CPA...	0.03	OrthoFinder output from all 47 species
LOC_Os11g03070.1	CHX15, ATCHX15,...	proton:monovalent cation antiporter (CHX)	0.04	OrthoFinder output from all 47 species
LOC_Os12g42200.1	ATCHX19, CHX19,...	proton:monovalent cation antiporter (CHX)	0.02	OrthoFinder output from all 47 species
MA_125428g0010	ATCHX20, CHX20	Cation/H(+) antiporter 20 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_5796458g0010	ATCHX20, CHX20	Cation/H(+) antiporter 20 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Msp_g20059	ATCHX19, CHX19	proton:monovalent cation antiporter *(CHX) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001982	ATCHX18, CHX18	proton:monovalent cation antiporter *(CHX) & original...	0.03	OrthoFinder output from all 47 species
Solyc02g021410.4.1	CHX15, ATCHX15,...	proton:monovalent cation antiporter (CHX)	0.03	OrthoFinder output from all 47 species
Solyc03g032240.4.1	ATCHX2, CHX2,...	proton:monovalent cation antiporter (CHX)	0.03	OrthoFinder output from all 47 species
Solyc06g009240.4.1	CHX15, ATCHX15,...	proton:monovalent cation antiporter (CHX)	0.04	OrthoFinder output from all 47 species
Solyc08g016160.3.1	CHX15, ATCHX15,...	proton:monovalent cation antiporter (CHX)	0.02	OrthoFinder output from all 47 species
Solyc08g081820.4.1	ATCHX18, CHX18,...	proton:monovalent cation antiporter (CHX)	0.03	OrthoFinder output from all 47 species
Zm00001e003244_P001	ATCHX19, CHX19,...	proton:monovalent cation antiporter (CHX)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005451	obsolete monoatomic cation:proton antiporter activity	NAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	None	Extended
CC	GO:0005770	late endosome	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	IC	Interproscan
BP	GO:0006814	sodium ion transport	None	Extended
BP	GO:0006885	regulation of pH	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015081	sodium ion transmembrane transporter activity	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015385	sodium:proton antiporter activity	ISS	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0035725	sodium ion transmembrane transport	ISS	Interproscan
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
MF	GO:0051139	metal cation:proton antiporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140828	metal cation:monoatomic cation antiporter activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009690	cytokinin metabolic process	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
BP	GO:0031445	regulation of heterochromatin formation	IEP	HCCA
BP	GO:0031453	positive regulation of heterochromatin formation	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0090308	regulation of DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0090309	positive regulation of DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0120261	regulation of heterochromatin organization	IEP	HCCA
BP	GO:0120263	positive regulation of heterochromatin organization	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1902275	regulation of chromatin organization	IEP	HCCA
BP	GO:1905269	positive regulation of chromatin organization	IEP	HCCA
BP	GO:2001252	positive regulation of chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006153	Cation/H_exchanger	39	423

External Links

No external refs found!

AT5G41610 (ATCHX18, CHX18)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation