1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G41140

AT5G41140


Description : Myosin heavy chain-related protein


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G41140
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Adi_g011579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43621.t1 Aspi01Gene43621 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014174 No alias not classified & original description: CDS=345-4727 0.02 OrthoFinder output from all 47 species
Dac_g12522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008970001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01016161001 No alias WEB family protein At4g27595, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_26931 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Len_g08370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431386g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g04466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_1340V3.1 Pp3c17_1340 No annotation 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025686 No alias not classified & original description: CDS=1028-3349 0.03 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Solyc04g072630.4.1 Solyc04g072630 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc08g080780.4.1 Solyc08g080780 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g04859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Zm00001e018560_P002 Zm00001e018560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e039098_P003 Zm00001e039098 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0009833 plant-type primary cell wall biogenesis IEP HCCA
BP GO:0009908 flower development IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 11 149
No external refs found!