AT5G39890

Description : Protein of unknown function (DUF1637)

Gene families : OG0000819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G39890
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
Adi_g084362	No alias	cysteine oxidase *(PCO) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g116277	No alias	cysteine oxidase *(PCO) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g01502	No alias	cysteine oxidase *(PCO) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01008048001	No alias	Plant cysteine oxidase 2 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01011353001	No alias	Plant cysteine oxidase 2 OS=Arabidopsis thaliana	0.1	OrthoFinder output from all 47 species
GSVIVT01029951001	No alias	Plant cysteine oxidase 1 OS=Arabidopsis thaliana	0.1	OrthoFinder output from all 47 species
Gb_07828	No alias	cysteine oxidase (PCO)	0.03	OrthoFinder output from all 47 species
LOC_Os03g45250.1	LOC_Os03g45250	cysteine oxidase (PCO)	0.03	OrthoFinder output from all 47 species
LOC_Os08g37470.1	LOC_Os08g37470	cysteine oxidase (PCO)	0.04	OrthoFinder output from all 47 species
LOC_Os12g42860.1	LOC_Os12g42860	cysteine oxidase (PCO)	0.06	OrthoFinder output from all 47 species
Pir_g05769	No alias	cysteine oxidase *(PCO) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013854	No alias	cysteine oxidase *(PCO) & original description: CDS=973-2100	0.03	OrthoFinder output from all 47 species
Smo90722	No alias	Plant cysteine oxidase 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Solyc02g067440.3.1	Solyc02g067440	cysteine oxidase (PCO)	0.07	OrthoFinder output from all 47 species
Solyc03g113130.3.1	Solyc03g113130	cysteine oxidase (PCO)	0.04	OrthoFinder output from all 47 species
Zm00001e003280_P001	Zm00001e003280	cysteine oxidase (PCO)	0.04	OrthoFinder output from all 47 species
Zm00001e003400_P001	Zm00001e003400	cysteine oxidase (PCO)	0.04	OrthoFinder output from all 47 species
Zm00001e005237_P002	Zm00001e005237	cysteine oxidase (PCO)	0.11	OrthoFinder output from all 47 species
Zm00001e032570_P002	Zm00001e032570	cysteine oxidase (PCO)	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	RCA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010089	xylem development	RCA	Interproscan
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Interproscan
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	RCA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002238	response to molecule of fungal origin	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0004737	pyruvate decarboxylase activity	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
BP	GO:0009061	anaerobic respiration	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009685	gibberellin metabolic process	IEP	HCCA
BP	GO:0009686	gibberellin biosynthetic process	IEP	HCCA
BP	GO:0009739	response to gibberellin	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0016101	diterpenoid metabolic process	IEP	HCCA
BP	GO:0016102	diterpenoid biosynthetic process	IEP	HCCA
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	HCCA
MF	GO:0016752	sinapoyltransferase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012864	PCO/ADO	78	274

External Links

No external refs found!

AT5G39890

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation