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  5. AT5G39790

AT5G39790


Description : 5'-AMP-activated protein kinase-related


Gene families : OG0005315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G39790

Target Alias Description ECC score Gene Family Method Actions
Adi_g045854 No alias scaffold protein of amylose biosynthesis *(PTST1) &... 0.03 OrthoFinder output from all 47 species
Ehy_g10906 No alias scaffold protein of amylose biosynthesis *(PTST1) &... 0.04 OrthoFinder output from all 47 species
Len_g23201 No alias scaffold protein of amylose biosynthesis *(PTST1) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007317 No alias scaffold protein of amylose biosynthesis *(PTST1) &... 0.02 OrthoFinder output from all 47 species
Spa_g02617 No alias scaffold protein of amylose biosynthesis *(PTST1) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
MF GO:0030247 polysaccharide binding IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010020 chloroplast fission IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0031312 extrinsic component of organelle membrane IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
CC GO:0035452 extrinsic component of plastid membrane IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0043572 plastid fission IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0045962 positive regulation of development, heterochronic IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 195 264
No external refs found!