AT5G39040 (ALS1, ATTAP2, TAP2)

Aliases : ALS1, ATTAP2, TAP2

Description : transporter associated with antigen processing protein 2

Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G39040

Target	Alias	Description	ECC score	Gene Family Method
Aev_g04811	ALS1, ATTAP2, TAP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28818.t2	ALS1, ATTAP2,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene28819.t1	ALS1, ATTAP2,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cre16.g692300	ATTAP1, TAP1	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Dac_g02863	ALS1, ATTAP2, TAP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000325	plant-type vacuole	IDA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0005886	plasma membrane	IBA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006857	oligopeptide transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010044	response to aluminum ion	IMP	Interproscan
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015421	ABC-type oligopeptide transporter activity	IBA	Interproscan
MF	GO:0015440	ABC-type peptide transporter activity	None	Extended
BP	GO:0015833	peptide transport	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0035672	oligopeptide transmembrane transport	IBA	Interproscan
MF	GO:0035673	oligopeptide transmembrane transporter activity	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	ISS	Interproscan
BP	GO:0042886	amide transport	None	Extended
MF	GO:0042887	amide transmembrane transporter activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IBA	Interproscan
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1904680	peptide transmembrane transporter activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006623	protein targeting to vacuole	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006833	water transport	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0019632	shikimate metabolic process	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0042044	fluid transport	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0072665	protein localization to vacuole	IEP	HCCA
BP	GO:0072666	establishment of protein localization to vacuole	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	414	564
IPR011527	ABC1_TM_dom	71	346

External Links

No external refs found!

AT5G39040 (ALS1, ATTAP2, TAP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation