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  5. AT5G38386

AT5G38386


Description : F-box/RNI-like superfamily protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G38386

Target Alias Description ECC score Gene Family Method Actions
AT2G29930 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G44180 No alias syntaxin-related family protein 0.08 OrthoFinder output from all 47 species
AT3G59270 No alias FBD-like domain family protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006021 inositol biosynthetic process IEP HCCA
BP GO:0006089 lactate metabolic process IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity IEP HCCA
MF GO:0008934 inositol monophosphate 1-phosphatase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009438 methylglyoxal metabolic process IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
MF GO:0010347 L-galactose-1-phosphate phosphatase activity IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019852 L-ascorbic acid metabolic process IEP HCCA
BP GO:0019853 L-ascorbic acid biosynthetic process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0042182 ketone catabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046185 aldehyde catabolic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051596 methylglyoxal catabolic process IEP HCCA
MF GO:0052745 inositol phosphate phosphatase activity IEP HCCA
MF GO:0052834 inositol monophosphate phosphatase activity IEP HCCA
BP GO:0061727 methylglyoxal catabolic process to lactate IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
MF GO:0070456 galactose-1-phosphate phosphatase activity IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
BP GO:1901334 lactone metabolic process IEP HCCA
BP GO:1901336 lactone biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 39
No external refs found!