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  5. AT5G37840

AT5G37840


Description : BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0001373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001373_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G37840
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00035620 evm_27.TU.AmTr_v1... Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00021p00227090 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00077p00166320 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00113p00026730 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G64700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT1G71015 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Aspi01Gene57399.t1 Aspi01Gene57399 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30811 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008403001 No alias Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027432001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_33937 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_33939 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40213 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33210.1 LOC_Os08g33210 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g25690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_356354g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_37203g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_394398g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_568302g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_853405g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_91700g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_953514g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g39267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55076 At17.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g008210.4.1 At17.1, Solyc05g008210 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc05g008220.4.1 At17.1, Solyc05g008220 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g005020.3.1 Solyc10g005020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e004161_P002 Zm00001e004161 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034082_P002 Zm00001e034082 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e036745_P001 Zm00001e036745 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009682 induced systemic resistance IEP HCCA
BP GO:0010154 fruit development IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071249 cellular response to nitrate IEP HCCA
BP GO:1901699 cellular response to nitrogen compound IEP HCCA
BP GO:1902170 cellular response to reactive nitrogen species IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 132
No external refs found!