AT5G37780 (TCH1, CAM1, ACAM-1)


Aliases : TCH1, CAM1, ACAM-1

Description : calmodulin 1


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G37780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00113890 CAM3, acam-3,... Calmodulin OS=Medicago sativa 0.05 OrthoFinder output from all 47 species
Adi_g002632 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021511 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g045838 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051294 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05659 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07660 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36845 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10087 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0080.g038455 No alias not classified & original description: CDS=276-527 0.03 OrthoFinder output from all 47 species
Cba_g08304 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G013100.1 CAM3, acam-3,... calcium sensor *(CML) & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000692.65 ACAM-6, CAM6 Calmodulin-2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021435.44 ACAM-6, CAM6 Calmodulin OS=Mougeotia scalaris 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021435.47 ACAM-6, CAM6 Calmodulin OS=Mougeotia scalaris 0.03 OrthoFinder output from all 47 species
Cre03.g150300 ACAM-6, CAM6 Calmodulin-3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Cre03.g178150 ACAM-6, CAM6 Calmodulin OS=Chlamydomonas reinhardtii 0.07 OrthoFinder output from all 47 species
LOC_Os01g17190.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.04 OrthoFinder output from all 47 species
LOC_Os05g41210.1 ACAM-6, CAM6,... Calmodulin-related protein OS=Petunia hybrida... 0.05 OrthoFinder output from all 47 species
Lfl_g28621 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
MA_66144g0010 CAM3, acam-3 Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Msp_g04344 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10911 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14970 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63264 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36671 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g098050.3.1 CAM3, acam-3,... Calmodulin OS=Solanum lycopersicum (sp|p27161|calm_sollc : 234.0) 0.03 OrthoFinder output from all 47 species
Spa_g02829 TCH1, CAM1, ACAM-1 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26354 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
MF GO:0005509 calcium ion binding NAS Interproscan
BP GO:0005513 detection of calcium ion ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0009612 response to mechanical stimulus IEP Interproscan
BP GO:0009612 response to mechanical stimulus RCA Interproscan
BP GO:0019722 calcium-mediated signaling RCA Interproscan
BP GO:0030048 actin filament-based movement RCA Interproscan
BP GO:0051645 Golgi localization RCA Interproscan
BP GO:0051646 mitochondrion localization RCA Interproscan
BP GO:0060151 peroxisome localization RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
CC GO:0000785 chromatin IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
MF GO:0030527 structural constituent of chromatin IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
CC GO:0031982 vesicle IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 146
IPR002048 EF_hand_dom 12 73
No external refs found!