Aliases : TCH1, CAM1, ACAM-1
Description : calmodulin 1
Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00095p00113890 | CAM3, acam-3,... | Calmodulin OS=Medicago sativa | 0.05 | OrthoFinder output from all 47 species | |
Adi_g002632 | ACAM-6, CAM6 | calcium sensor *(CML) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g021511 | ACAM-6, CAM6 | calcium sensor *(CML) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Adi_g045838 | CAM3, acam-3 | calcium sensor *(CML) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g051294 | ACAM-6, CAM6 | calcium sensor *(CML) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g05659 | ACAM-6, CAM6 | calcium sensor *(CML) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g07660 | ACAM-6, CAM6 | calcium sensor *(CML) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g36845 | CAM3, acam-3 | calcium sensor *(CML) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g10087 | CAM3, acam-3 | calcium sensor *(CML) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0080.g038455 | No alias | not classified & original description: CDS=276-527 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g08304 | ACAM-6, CAM6 | calcium sensor *(CML) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.20G013100.1 | CAM3, acam-3,... | calcium sensor *(CML) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000692.65 | ACAM-6, CAM6 | Calmodulin-2 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021435.44 | ACAM-6, CAM6 | Calmodulin OS=Mougeotia scalaris | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021435.47 | ACAM-6, CAM6 | Calmodulin OS=Mougeotia scalaris | 0.03 | OrthoFinder output from all 47 species | |
Cre03.g150300 | ACAM-6, CAM6 | Calmodulin-3 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
Cre03.g178150 | ACAM-6, CAM6 | Calmodulin OS=Chlamydomonas reinhardtii | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os01g17190.1 | ACAM-6, CAM6,... | Calmodulin-related protein OS=Petunia hybrida... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g41210.1 | ACAM-6, CAM6,... | Calmodulin-related protein OS=Petunia hybrida... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g28621 | CAM3, acam-3 | calcium sensor *(CML) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_66144g0010 | CAM3, acam-3 | Calmodulin-related protein OS=Petunia hybrida... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g04344 | ACAM-6, CAM6 | calcium sensor *(CML) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g10911 | CAM3, acam-3 | calcium sensor *(CML) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g14970 | CAM3, acam-3 | calcium sensor *(CML) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pir_g63264 | CAM3, acam-3 | calcium sensor *(CML) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g36671 | CAM3, acam-3 | calcium sensor *(CML) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g098050.3.1 | CAM3, acam-3,... | Calmodulin OS=Solanum lycopersicum (sp|p27161|calm_sollc : 234.0) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g02829 | TCH1, CAM1, ACAM-1 | calcium sensor *(CML) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g26354 | CAM3, acam-3 | calcium sensor *(CML) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005509 | calcium ion binding | ISS | Interproscan |
MF | GO:0005509 | calcium ion binding | NAS | Interproscan |
BP | GO:0005513 | detection of calcium ion | ISS | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
BP | GO:0009612 | response to mechanical stimulus | IEP | Interproscan |
BP | GO:0009612 | response to mechanical stimulus | RCA | Interproscan |
BP | GO:0019722 | calcium-mediated signaling | RCA | Interproscan |
BP | GO:0030048 | actin filament-based movement | RCA | Interproscan |
BP | GO:0051645 | Golgi localization | RCA | Interproscan |
BP | GO:0051646 | mitochondrion localization | RCA | Interproscan |
BP | GO:0060151 | peroxisome localization | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
CC | GO:0000785 | chromatin | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
MF | GO:0004871 | obsolete signal transducer activity | IEP | HCCA |
MF | GO:0005527 | macrolide binding | IEP | HCCA |
MF | GO:0005528 | FK506 binding | IEP | HCCA |
CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | HCCA |
CC | GO:0005768 | endosome | IEP | HCCA |
CC | GO:0005770 | late endosome | IEP | HCCA |
CC | GO:0005771 | multivesicular body | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
CC | GO:0005795 | Golgi stack | IEP | HCCA |
CC | GO:0005829 | cytosol | IEP | HCCA |
CC | GO:0005886 | plasma membrane | IEP | HCCA |
BP | GO:0006084 | acetyl-CoA metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006555 | methionine metabolic process | IEP | HCCA |
BP | GO:0006637 | acyl-CoA metabolic process | IEP | HCCA |
BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | HCCA |
BP | GO:0006665 | sphingolipid metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
MF | GO:0008320 | protein transmembrane transporter activity | IEP | HCCA |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009086 | methionine biosynthetic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
CC | GO:0009504 | cell plate | IEP | HCCA |
CC | GO:0009543 | chloroplast thylakoid lumen | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
CC | GO:0016272 | prefoldin complex | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
BP | GO:0016572 | obsolete histone phosphorylation | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | HCCA |
BP | GO:0030148 | sphingolipid biosynthetic process | IEP | HCCA |
MF | GO:0030527 | structural constituent of chromatin | IEP | HCCA |
BP | GO:0030865 | cortical cytoskeleton organization | IEP | HCCA |
BP | GO:0031122 | cytoplasmic microtubule organization | IEP | HCCA |
CC | GO:0031410 | cytoplasmic vesicle | IEP | HCCA |
CC | GO:0031977 | thylakoid lumen | IEP | HCCA |
CC | GO:0031978 | plastid thylakoid lumen | IEP | HCCA |
CC | GO:0031982 | vesicle | IEP | HCCA |
MF | GO:0033218 | amide binding | IEP | HCCA |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
BP | GO:0035383 | thioester metabolic process | IEP | HCCA |
BP | GO:0043622 | cortical microtubule organization | IEP | HCCA |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
BP | GO:0046519 | sphingoid metabolic process | IEP | HCCA |
BP | GO:0046520 | sphingoid biosynthetic process | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0097708 | intracellular vesicle | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140318 | protein transporter activity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |