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AT5G37560


Description : RING/U-box superfamily protein


Gene families : OG0000695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000695_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G37560

Target Alias Description ECC score Gene Family Method Actions
AT2G26130 No alias RING/U-box protein with C6HC-type zinc finger 0.03 OrthoFinder output from all 47 species
AT3G43180 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g40090 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016056001 No alias Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Nbi_g08847 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.02 OrthoFinder output from all 47 species
Smo415256 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo48392 No alias ATP-dependent RNA helicase DEAH12, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 59 147
IPR002867 IBR_dom 249 314
IPR002867 IBR_dom 329 383
No external refs found!