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AT5G37140


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG0001121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G37140
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00242530 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00163510 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00163850 evm_27.TU.AmTr_v1... Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G52090 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.42 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g39815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010254001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028740001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g45910.1 LOC_Os02g45910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g49310.1 LOC_Os04g49310 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g06290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004407 No alias not classified & original description: CDS=1-1290 0.03 OrthoFinder output from all 47 species
Spa_g18276 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e007061_P002 Zm00001e007061 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e007146_P001 Zm00001e007146 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e010960_P001 Zm00001e010960 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034966_P001 Zm00001e034966 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041374_P001 Zm00001e041374 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
MF GO:0047268 galactinol-raffinose galactosyltransferase activity IEP HCCA
BP GO:0048240 sperm capacitation IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000008 regulation of protein localization to cell surface IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!