Gb_40169


Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 211.0)


Gene families : OG_01_0000390 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000390_tree ,
OG_02_0000129 (LandPlants) Phylogenetic Tree(s): OG_02_0000129_tree ,
OG_03_0000040 (SeedPlants) Phylogenetic Tree(s): OG_03_0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40169
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Gb_01443 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_02142 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Gb_02146 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 Archaeplastida
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 Archaeplastida
Gb_05094 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.13 Archaeplastida
Gb_06244 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Gb_07759 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 Archaeplastida
Gb_07934 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_08526 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.19 Archaeplastida
Gb_11892 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_13743 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 Archaeplastida
Gb_13767 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Gb_14265 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Gb_15407 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.16 Archaeplastida
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 Archaeplastida
Gb_18114 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_18380 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_19756 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_20651 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 Archaeplastida
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Gb_25019 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 Archaeplastida
Gb_26000 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Gb_26083 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_26646 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_26702 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.14 Archaeplastida
Gb_28461 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_29291 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_30022 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_31534 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Gb_32699 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 Archaeplastida
Gb_33085 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_33272 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_33568 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 Archaeplastida
Gb_35456 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.13 Archaeplastida
Gb_38490 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 Archaeplastida
Gb_39693 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_41307 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_01443 No alias no hits & (original description: none) 0.05 LandPlants
Gb_02142 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 LandPlants
Gb_02146 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.13 LandPlants
Gb_03194 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 LandPlants
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 LandPlants
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 LandPlants
Gb_05094 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 LandPlants
Gb_06244 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 LandPlants
Gb_07759 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.19 LandPlants
Gb_07919 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_07934 No alias no hits & (original description: none) 0.03 LandPlants
Gb_08526 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.19 LandPlants
Gb_11892 No alias no hits & (original description: none) 0.03 LandPlants
Gb_13694 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 LandPlants
Gb_13743 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.21 LandPlants
Gb_13767 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 LandPlants
Gb_14265 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 LandPlants
Gb_14957 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.12 LandPlants
Gb_15407 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.19 LandPlants
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 LandPlants
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 LandPlants
Gb_18114 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 LandPlants
Gb_18380 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 LandPlants
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 LandPlants
Gb_19756 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 LandPlants
Gb_20651 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 LandPlants
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_24217 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 LandPlants
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 LandPlants
Gb_25019 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 LandPlants
Gb_26000 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 LandPlants
Gb_26083 No alias no hits & (original description: none) 0.03 LandPlants
Gb_26646 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 LandPlants
Gb_26702 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 LandPlants
Gb_26797 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 LandPlants
Gb_28461 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_29291 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.2 LandPlants
Gb_30022 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 LandPlants
Gb_31534 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 LandPlants
Gb_32699 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 LandPlants
Gb_33085 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 LandPlants
Gb_33272 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 LandPlants
Gb_33568 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.18 LandPlants
Gb_35456 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 LandPlants
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 LandPlants
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.13 LandPlants
Gb_38490 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 LandPlants
Gb_39390 No alias no hits & (original description: none) 0.03 LandPlants
Gb_39693 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 LandPlants
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 LandPlants
Gb_41307 No alias no hits & (original description: none) 0.07 LandPlants
Pp3c1_2090V3.1 No alias No annotation 0.02 LandPlants
Pp3c7_3400V3.1 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 LandPlants
Gb_01443 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_02142 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 SeedPlants
Gb_02146 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 SeedPlants
Gb_03194 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 SeedPlants
Gb_04117 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 SeedPlants
Gb_04256 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_04911 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 SeedPlants
Gb_05094 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.14 SeedPlants
Gb_06244 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 SeedPlants
Gb_07759 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 SeedPlants
Gb_07919 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_07934 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_08526 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 SeedPlants
Gb_11892 No alias no hits & (original description: none) 0.04 SeedPlants
Gb_13694 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 SeedPlants
Gb_13743 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 SeedPlants
Gb_13767 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 SeedPlants
Gb_14265 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 SeedPlants
Gb_14957 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.12 SeedPlants
Gb_15407 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 SeedPlants
Gb_15410 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 SeedPlants
Gb_15909 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 SeedPlants
Gb_17161 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 SeedPlants
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 SeedPlants
Gb_18114 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 SeedPlants
Gb_18380 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 SeedPlants
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.1 SeedPlants
Gb_18990 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 SeedPlants
Gb_19756 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_20537 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 SeedPlants
Gb_20651 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.15 SeedPlants
Gb_23276 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 SeedPlants
Gb_24217 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 SeedPlants
Gb_24315 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 SeedPlants
Gb_25019 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.13 SeedPlants
Gb_26000 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 SeedPlants
Gb_26007 No alias no hits & (original description: none) 0.03 SeedPlants
Gb_26083 No alias no hits & (original description: none) 0.03 SeedPlants
Gb_26646 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 SeedPlants
Gb_26702 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 SeedPlants
Gb_26797 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 SeedPlants
Gb_28461 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 SeedPlants
Gb_29291 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.21 SeedPlants
Gb_30022 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 SeedPlants
Gb_31534 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 SeedPlants
Gb_32699 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 SeedPlants
Gb_32814 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 SeedPlants
Gb_33085 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.16 SeedPlants
Gb_33272 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.16 SeedPlants
Gb_33568 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.16 SeedPlants
Gb_33898 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.2 SeedPlants
Gb_34632 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 SeedPlants
Gb_34810 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 SeedPlants
Gb_35456 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 SeedPlants
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 SeedPlants
Gb_36638 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.13 SeedPlants
Gb_36749 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.22 SeedPlants
Gb_38490 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.16 SeedPlants
Gb_39390 No alias no hits & (original description: none) 0.03 SeedPlants
Gb_39735 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 SeedPlants
Gb_41307 No alias no hits & (original description: none) 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013103 RVT_2 1 163
No external refs found!