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  5. AT5G35160

AT5G35160


Description : Endomembrane protein 70 protein family


Gene families : OG0001938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G35160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00090590 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g005548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14360 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g05444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G022900.1 Ceric.26G022900 not classified & original description: pacid=50600157... 0.03 OrthoFinder output from all 47 species
Ceric.30G004200.1 Ceric.30G004200 not classified & original description: pacid=50608321... 0.04 OrthoFinder output from all 47 species
Ceric.39G060600.1 Ceric.39G060600 not classified & original description: pacid=50582436... 0.04 OrthoFinder output from all 47 species
Cre12.g494350 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Dac_g07323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19738 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g02921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001034001 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01030146001 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Gb_09059 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os02g49050.2 LOC_Os02g49050 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
LOC_Os02g55440.2 LOC_Os02g55440 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g07650.1 LOC_Os05g07650 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os08g38820.1 LOC_Os08g38820 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g07755 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g10092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05591 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10428354g0010 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_371g0020 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Mp6g10640.1 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g03216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13368 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo175941 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Solyc07g007030.1.1 Solyc07g007030 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc07g056050.1.1 Solyc07g056050 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc12g010390.2.1 Solyc12g010390 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g22948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015684_P003 Zm00001e015684 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e016131_P001 Zm00001e016131 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004839 ubiquitin activating enzyme activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006409 tRNA export from nucleus IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030658 transport vesicle membrane IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
CC GO:0030660 Golgi-associated vesicle membrane IEP HCCA
CC GO:0030662 coated vesicle membrane IEP HCCA
CC GO:0030665 clathrin-coated vesicle membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0051031 tRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080119 ER body organization IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0097064 ncRNA export from nucleus IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 43 582
No external refs found!