AT5G27750


Description : F-box/FBD-like domains containing protein


Gene families : OG0007014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007014_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G27750
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G16940 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from all 47 species
AT1G32020 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT1G60400 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G60410 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT1G66640 No alias RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G78760 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from all 47 species
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from all 47 species
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006396 RNA processing RCA Interproscan
BP GO:0009410 response to xenobiotic stimulus RCA Interproscan
BP GO:0009640 photomorphogenesis RCA Interproscan
BP GO:0016567 protein ubiquitination RCA Interproscan
BP GO:0016571 histone methylation RCA Interproscan
BP GO:0016579 protein deubiquitination RCA Interproscan
BP GO:0045893 positive regulation of DNA-templated transcription RCA Interproscan
BP GO:0048522 positive regulation of cellular process RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0047268 galactinol-raffinose galactosyltransferase activity IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 6 42
IPR006566 FBD 381 423
IPR013101 Leu-rich_rpt_2 163 188
No external refs found!