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  5. AT5G27280

AT5G27280


Description : Zim17-type zinc finger protein


Gene families : OG0002207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G27280

Target Alias Description ECC score Gene Family Method Actions
Ceric.11G094600.1 Ceric.11G094600 not classified & original description: pacid=50596167... 0.08 OrthoFinder output from all 47 species
Gb_31453 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g50870.1 LOC_Os06g50870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g44091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g082020.3.1 Solyc04g082020 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e013301_P001 Zm00001e013301 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e030158_P001 Zm00001e030158 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
BP GO:0003008 system process IEP HCCA
BP GO:0003013 circulatory system process IEP HCCA
BP GO:0003018 vascular process in circulatory system IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
MF GO:0008506 sucrose:proton symporter activity IEP HCCA
MF GO:0008515 sucrose transmembrane transporter activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
MF GO:0009669 sucrose:monoatomic cation symporter activity IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP HCCA
BP GO:0009915 phloem sucrose loading IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010044 response to aluminum ion IEP HCCA
BP GO:0010232 vascular transport IEP HCCA
BP GO:0010233 phloem transport IEP HCCA
BP GO:0010478 chlororespiration IEP HCCA
MF GO:0015154 disaccharide transmembrane transporter activity IEP HCCA
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP HCCA
BP GO:0015766 disaccharide transport IEP HCCA
BP GO:0015770 sucrose transport IEP HCCA
BP GO:0015772 oligosaccharide transport IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0031056 regulation of histone modification IEP HCCA
BP GO:0031063 regulation of histone deacetylation IEP HCCA
CC GO:0031357 obsolete integral component of chloroplast inner membrane IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
BP GO:0048513 animal organ development IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0061077 chaperone-mediated protein folding IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0090311 regulation of protein deacetylation IEP HCCA
BP GO:0110126 phloem loading IEP HCCA
InterPro domains Description Start Stop
IPR007853 Znf_DNL-typ 123 172
No external refs found!