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  5. AT5G25860

AT5G25860


Description : F-box/RNI-like superfamily protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25860
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G47915 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT1G47920 No alias RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G64540 No alias F-box/FBD-like domains containing protein 0.07 OrthoFinder output from all 47 species
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.12 OrthoFinder output from all 47 species
AT3G44060 No alias F-box/RNI-like superfamily protein 0.1 OrthoFinder output from all 47 species
AT3G44080 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT3G44090 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT3G44180 No alias syntaxin-related family protein 0.02 OrthoFinder output from all 47 species
AT3G44810 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT3G49150 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G54160 No alias RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G58820 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G58920 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G58980 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G59160 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G59170 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G59180 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from all 47 species
AT4G00320 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G13960 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G22280 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.15 OrthoFinder output from all 47 species
AT5G38392 No alias No description available 0.07 OrthoFinder output from all 47 species
AT5G41630 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G41830 No alias RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0006863 purine nucleobase transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 16 47
No external refs found!