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  5. AT5G25850

AT5G25850


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0007014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25850
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G32020 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT1G60400 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT1G69630 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G78760 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G23955 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from all 47 species
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
AT5G22720 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G44940 No alias F-box/RNI-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT5G44960 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.1 OrthoFinder output from all 47 species
AT5G53637 No alias No description available 0.05 OrthoFinder output from all 47 species
AT5G53640 No alias CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like... 0.03 OrthoFinder output from all 47 species
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 22 60
IPR013101 Leu-rich_rpt_2 164 189
IPR006566 FBD 405 450
No external refs found!