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AT5G25290


Description : F-box family protein with a domain of unknown function (DUF295)


Gene families : OG0008562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25290
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G10110 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT2G03560 No alias F-box family protein with a domain of unknown function (DUF295) 0.06 OrthoFinder output from all 47 species
AT2G03610 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT2G04810 No alias Protein of unknown function (DUF295) 0.14 OrthoFinder output from all 47 species
AT2G04830 No alias Protein of unknown function (DUF295) 0.14 OrthoFinder output from all 47 species
AT2G05970 No alias F-box family protein with a domain of unknown function (DUF295) 0.09 OrthoFinder output from all 47 species
AT4G10820 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT4G22060 No alias F-box family protein with a domain of unknown function (DUF295) 0.1 OrthoFinder output from all 47 species
AT4G22165 No alias F-box family protein with a domain of unknown function (DUF295) 0.14 OrthoFinder output from all 47 species
AT4G22170 No alias F-box family protein with a domain of unknown function (DUF295) 0.02 OrthoFinder output from all 47 species
AT5G38270 No alias F-box family protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005174 DUF295 320 374
IPR001810 F-box_dom 13 50
No external refs found!