AT5G25280


Description : serine-rich protein-related


Gene families : OG0000329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000329_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25280
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Adi_g057234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G038200.1 Ceric.23G038200 not classified & original description: pacid=50611305... 0.04 OrthoFinder output from all 47 species
GSVIVT01012865001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os02g32469.1 LOC_Os02g32469 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g55600.1 LOC_Os02g55600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g55610.1 LOC_Os02g55610 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g20600.1 LOC_Os03g20600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g08815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10215954g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10432433g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_119180g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g24638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g117290.1.1 Solyc03g117290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g009880.1.1 Solyc12g009880 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e016142_P001 Zm00001e016142 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005773 vacuole IEP HCCA
BP GO:0006089 lactate metabolic process IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009438 methylglyoxal metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
BP GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP HCCA
BP GO:0019747 regulation of isoprenoid metabolic process IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042182 ketone catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046185 aldehyde catabolic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051596 methylglyoxal catabolic process IEP HCCA
BP GO:0061077 chaperone-mediated protein folding IEP HCCA
BP GO:0061727 methylglyoxal catabolic process to lactate IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:0071071 regulation of phospholipid biosynthetic process IEP HCCA
BP GO:1902395 regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:1903725 regulation of phospholipid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!