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AT5G24620


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG0000168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G24620
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Adi_g044763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G002400.1 Ceric.01G002400 not classified & original description: pacid=50590500... 0.03 OrthoFinder output from all 47 species
Ehy_g03314 ATLP-3, TLP-3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g50240.1 LOC_Os06g50240 no description available(sp|q9ff29|pr5k_arath : 221.0) 0.02 OrthoFinder output from all 47 species
Ppi_g60388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000605 No alias not classified & original description: CDS=1-825 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003914 No alias not classified & original description: CDS=828-1658 0.03 OrthoFinder output from all 47 species
Smo118249 No alias Thaumatin-like protein 1 OS=Manilkara zapota 0.01 OrthoFinder output from all 47 species
Smo419455 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g48203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002643_P001 Zm00001e002643 no description available(sp|q9ff29|pr5k_arath : 266.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0051707 response to other organism ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
MF GO:0004575 sucrose alpha-glucosidase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
MF GO:0090599 alpha-glucosidase activity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001938 Thaumatin 31 251
No external refs found!