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  5. AT5G24600

AT5G24600


Description : Protein of unknown function, DUF599


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G24600

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00200080 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
Adi_g002820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26541.t1 Aspi01Gene26541 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g15748 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g13153 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g08550 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004185 No alias not classified & original description: CDS=213-944 0.03 OrthoFinder output from all 47 species
Tin_g45905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031445 regulation of heterochromatin formation IEP HCCA
BP GO:0031453 positive regulation of heterochromatin formation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044089 positive regulation of cellular component biogenesis IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090308 regulation of DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0090309 positive regulation of DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0120261 regulation of heterochromatin organization IEP HCCA
BP GO:0120263 positive regulation of heterochromatin organization IEP HCCA
BP GO:1902275 regulation of chromatin organization IEP HCCA
BP GO:1905269 positive regulation of chromatin organization IEP HCCA
BP GO:2001252 positive regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 10 224
No external refs found!