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  5. AT5G23930

AT5G23930


Description : Mitochondrial transcription termination factor family protein


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G23930
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00116710 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00225250 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00225430 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00236050 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00175390 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00059830 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.06 OrthoFinder output from all 47 species
AMTR_s02857p00005060 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AT3G46950 No alias Mitochondrial transcription termination factor family protein 0.06 OrthoFinder output from all 47 species
Adi_g110583 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02436 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49279 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12578 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15618 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54723 EMB2219 mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12846 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14738 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G017100.1 Ceric.20G017100 mTERF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G015700.1 Ceric.30G015700 mTERF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g09151 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22736 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13193 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
GSVIVT01036787001 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
Gb_07257 PTAC15 TAC15 cofactor of plastid-encoded RNA polymerase.... 0.06 OrthoFinder output from all 47 species
Gb_12966 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Gb_15878 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Gb_26176 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g33440.1 LOC_Os05g33440 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g33460.2 LOC_Os05g33460 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
LOC_Os06g12070.1 LOC_Os06g12070 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g12080.1 LOC_Os06g12080 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g24090.1 LOC_Os07g24090 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os11g10000.1 LOC_Os11g10000 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
LOC_Os11g10040.1 LOC_Os11g10040 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Len_g13324 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430524g0020 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_192398g0010 No alias transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
MA_3151g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_31885g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_493420g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Ore_g26508 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03790 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17760 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24968 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo419725 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
Solyc04g011700.2.1 Solyc04g011700 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Solyc04g072500.1.1 Solyc04g072500 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Solyc04g072520.3.1 Solyc04g072520 transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
Tin_g07429 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e022322_P001 Zm00001e022322 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Zm00001e027097_P001 Zm00001e027097 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP HCCA
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 91 426
No external refs found!