AT5G23580 (ATCPK12, CDPK9, ATCDPK9, CPK12)

Aliases : ATCPK12, CDPK9, ATCDPK9, CPK12

Description : calmodulin-like domain protein kinase 9

Gene families : OG0000042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G23580

Target	Alias	Description	ECC score	Gene Family Method
Ala_g02136	CPK17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Gb_10111	CPK1, ATCPK1	Calcium-dependent protein kinase 20 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_38179	CPK13	protein kinase (CDPK). nitrate response regulator kinase...	0.03	OrthoFinder output from all 47 species
Len_g37572	CPK34	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10428197g0010	CPK13	Calcium-dependent protein kinase 16 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_8587931g0010	PEPKR2	Serine/threonine-protein kinase PEPKR2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_8898899g0010	CPK5, ATCPK5	protein kinase (CDPK)	0.03	OrthoFinder output from all 47 species
Msp_g14299	CPK17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ore_g09598	CPK34	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Pnu_g10208	CPK34	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pp3c20_12010V3.1	CPK34, Pp3c20_12010	calmodulin-domain protein kinase cdpk isoform 2	0.01	OrthoFinder output from all 47 species
Pp3c2_4720V3.1	SNRK1.2, AKIN11,...	SNF1 kinase homolog 11	0.02	OrthoFinder output from all 47 species
Ppi_g03885	CPK34	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Zm00001e005933_P001	CPK20, Zm00001e005933	protein kinase (CDPK)	0.04	OrthoFinder output from all 47 species
Zm00001e011895_P003	CPK20, Zm00001e011895	protein kinase (CDPK)	0.03	OrthoFinder output from all 47 species
Zm00001e042293_P001	CPK13, Zm00001e042293	protein kinase (CDPK)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	None	Extended
MF	GO:0004683	calmodulin-dependent protein kinase activity	ISS	Interproscan
BP	GO:0006468	protein phosphorylation	ISS	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009738	abscisic acid-activated signaling pathway	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000419	RNA polymerase V complex	IEP	HCCA
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
CC	GO:0005665	RNA polymerase II, core complex	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
CC	GO:0030880	RNA polymerase complex	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	25	280
IPR002048	EF_hand_dom	328	388
IPR002048	EF_hand_dom	399	459

External Links

No external refs found!

AT5G23580 (ATCPK12, CDPK9, ATCDPK9, CPK12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation