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AT5G22920


Description : CHY-type/CTCHY-type/RING-type Zinc finger protein


Gene families : OG0002193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22920

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031467001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01033674001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
MA_10429565g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.03 OrthoFinder output from all 47 species
MA_126866g0010 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.05 OrthoFinder output from all 47 species
Smo78412 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.05 OrthoFinder output from all 47 species
Zm00001e004657_P008 Zm00001e004657 E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008913 Znf_CHY 27 108
IPR001841 Znf_RING 162 205
IPR039512 RCHY1_zinc-ribbon 210 268
No external refs found!