1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G22660

AT5G22660


Description : FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein


Gene families : OG0007014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22660
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT1G16930 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G66320 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008142 oxysterol binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0010306 rhamnogalacturonan II biosynthetic process IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010396 rhamnogalacturonan II metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0052325 cell wall pectin biosynthetic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 14 50
IPR013101 Leu-rich_rpt_2 159 184
No external refs found!