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  5. AT5G22410

AT5G22410 (RHS18)


Aliases : RHS18

Description : root hair specific 18


Gene families : OG0001968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22410
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00155980 evm_27.TU.AmTr_v1... Peroxidase 44 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Adi_g111439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20622 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53367.t1 Aspi01Gene53367 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70038.t1 Aspi01Gene70038 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g40629 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.17G026000.1 Ceric.17G026000 not classified & original description: pacid=50617484... 0.09 OrthoFinder output from all 47 species
Ceric.17G026200.1 Ceric.17G026200 not classified & original description: pacid=50617597... 0.14 OrthoFinder output from all 47 species
Ceric.17G048700.1 RHS18, Ceric.17G048700 not classified & original description: pacid=50617425... 0.03 OrthoFinder output from all 47 species
Ceric.20G084700.1 Ceric.20G084700 not classified & original description: pacid=50565960... 0.02 OrthoFinder output from all 47 species
Ceric.24G072100.1 Ceric.24G072100 not classified & original description: pacid=50629970... 0.04 OrthoFinder output from all 47 species
Ceric.35G020300.1 Ceric.35G020300 not classified & original description: pacid=50581063... 0.11 OrthoFinder output from all 47 species
Ceric.35G020700.1 Ceric.35G020700 not classified & original description: pacid=50581493... 0.09 OrthoFinder output from all 47 species
Ceric.35G056900.1 Ceric.35G056900 not classified & original description: pacid=50580842... 0.04 OrthoFinder output from all 47 species
Ceric.37G047100.1 Ceric.37G047100 not classified & original description: pacid=50616236... 0.05 OrthoFinder output from all 47 species
Dac_g16992 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11209 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g01550.1 LOC_Os04g01550 Peroxidase 44 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g05220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10293471g0010 No alias Peroxidase 57 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10372670g0010 No alias Peroxidase 57 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_10426168g0010 No alias Peroxidase 57 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_180710g0010 No alias Peroxidase 57 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_257706g0010 No alias Peroxidase 57 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g06229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g35491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27387 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46607 PA2, ATPA2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g58212 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g009400.3.1 RHS18, Solyc01g009400 Peroxidase 60 OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
Solyc01g009410.3.1 RHS18, Solyc01g009410 Peroxidase 60 OS=Arabidopsis thaliana... 0.13 OrthoFinder output from all 47 species
Solyc10g084200.2.1 Solyc10g084200 Peroxidase 44 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Solyc11g039570.3.1 Solyc11g039570 Peroxidase 44 OS=Arabidopsis thaliana... 0.16 OrthoFinder output from all 47 species
Spa_g08924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0010054 trichoblast differentiation RCA Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008526 phosphatidylinositol transfer activity IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0035864 response to potassium ion IEP HCCA
BP GO:0035865 cellular response to potassium ion IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
MF GO:0120014 phospholipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase 45 288
No external refs found!