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  5. AT5G21970

AT5G21970


Description : Ubiquitin carboxyl-terminal hydrolase family protein


Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G21970

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00229190 emb1692,... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00021p00241290 WTF1, AtWTF1,... RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
Adi_g085887 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene22130.t1 WTF1, AtWTF1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18275 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01027077001 WTF1, AtWTF1 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Gb_34809 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.04 OrthoFinder output from all 47 species
MA_175611g0010 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Ore_g06540 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10310 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000591_P002 Zm00001e000591 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 56 384
No external refs found!