AT5G21150 (AGO9)

Aliases : AGO9

Description : Argonaute family protein

Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G21150

Target	Alias	Description	ECC score	Gene Family Method
AT1G31290	AGO3	ARGONAUTE 3	0.04	OrthoFinder output from all 47 species
Als_g06375	AGO9	siRNA-integrating factor *(AGO) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g04459	AGO1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g18592	AGO9	siRNA-integrating factor *(AGO) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene29180.t1	AGO1, Aspi01Gene29180	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene71412.t1	AGO9, Aspi01Gene71412	siRNA-integrating factor *(AGO) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0460.g072055	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.03	OrthoFinder output from all 47 species
GSVIVT01012529001	AGO7, ZIP	Protein argonaute 7 OS=Oryza sativa subsp. japonica	0.04	OrthoFinder output from all 47 species
GSVIVT01029383001	AGO1	Chromatin organisation.DNA methylation.canonical...	0.03	OrthoFinder output from all 47 species
LOC_Os06g51310.2	AGO1, LOC_Os06g51310	RIS-Complex miRNA recruiting factor (AGO1)	0.03	OrthoFinder output from all 47 species
Len_g35246	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_14457g0010	AGO9	Protein argonaute 4A OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_161177g0010	AGO7, ZIP	Protein argonaute 7 OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
Msp_g13472	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.03	OrthoFinder output from all 47 species
Ore_g30168	AGO1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g52026	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.02	OrthoFinder output from all 47 species
Pir_g66376	AGO1	regulatory protein *(AGO7) of transacting siRNA pathway...	0.03	OrthoFinder output from all 47 species
Ppi_g29047	AGO1	regulatory protein *(AGO7) of transacting siRNA pathway...	0.02	OrthoFinder output from all 47 species
Sam_g38422	No alias	regulatory protein *(AGO7) of transacting siRNA pathway...	0.02	OrthoFinder output from all 47 species
Solyc01g010970.3.1	AGO7, ZIP, Solyc01g010970	Protein argonaute 7 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc02g069280.2.1	AGO2, Solyc02g069280	siRNA-binding factor (AGO2) of non-canonical RdDM pathway	0.03	OrthoFinder output from all 47 species
Solyc03g111760.3.1	AGO4, OCP11,...	Protein argonaute 4A OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Spa_g09278	AGO1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g30415	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.04	OrthoFinder output from all 47 species
Spa_g51306	AGO1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g54963	AGO1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e007233_P001	AGO1, Zm00001e007233	RIS-Complex miRNA recruiting factor (AGO1)	0.01	OrthoFinder output from all 47 species
Zm00001e010349_P002	AGO1, Zm00001e010349	Protein argonaute 18 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Zm00001e011432_P001	AGO5, Zm00001e011432	Protein argonaute MEL1 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Zm00001e025496_P001	AGO4, OCP11,...	siRNA-integrating factor (AGO)	0.02	OrthoFinder output from all 47 species
Zm00001e029696_P001	AGO1, Zm00001e029696	RIS-Complex miRNA recruiting factor (AGO1)	0.03	OrthoFinder output from all 47 species
Zm00001e030606_P001	PNH, AGO10, ZLL,...	RIS-Complex miRNA recruiting factor (AGO1)	0.02	OrthoFinder output from all 47 species
Zm00001e041452_P004	AGO1, Zm00001e041452	RIS-Complex miRNA recruiting factor (AGO1)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0010528	regulation of transposition	None	Extended
BP	GO:0010529	negative regulation of transposition	IMP	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0035197	siRNA binding	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048481	plant ovule development	IMP	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0061980	regulatory RNA binding	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008378	galactosyltransferase activity	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0031048	RNA-mediated heterochromatin formation	IEP	HCCA
BP	GO:0031507	heterochromatin formation	IEP	HCCA
MF	GO:0047268	galactinol-raffinose galactosyltransferase activity	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048441	petal development	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032474	Argonaute_N	48	203
IPR032472	ArgoL2	406	451
IPR003165	Piwi	551	857
IPR003100	PAZ_dom	269	396
IPR014811	ArgoL1	215	263

External Links

No external refs found!

AT5G21150 (AGO9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation