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  5. AT5G20610

AT5G20610


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink).


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20610

Target Alias Description ECC score Gene Family Method Actions
Adi_g016384 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15578 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10994 No alias actin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009511 No alias actin stability co-factor *(PMIR) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g12606 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015144001 No alias Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.07 OrthoFinder output from all 47 species
GSVIVT01035425001 No alias Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.03 OrthoFinder output from all 47 species
Gb_36372 No alias actin stability co-factor (PMIR) 0.03 OrthoFinder output from all 47 species
LOC_Os01g51640.1 LOC_Os01g51640 actin stability co-factor (PMIR) 0.03 OrthoFinder output from all 47 species
MA_7515g0010 No alias actin stability co-factor (PMIR) 0.04 OrthoFinder output from all 47 species
Ore_g36313 No alias actin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g24001 PMI1 actin stability factor *(PMI1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo111808 No alias Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.02 OrthoFinder output from all 47 species
Solyc05g032750.3.1 Solyc05g032750 actin stability co-factor (PMIR) 0.04 OrthoFinder output from all 47 species
Solyc08g062500.3.1 Solyc08g062500 actin stability co-factor (PMIR) 0.03 OrthoFinder output from all 47 species
Spa_g52624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004630 phospholipase D activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008158 hedgehog receptor activity IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032922 circadian regulation of gene expression IEP HCCA
CC GO:0034399 nuclear periphery IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090213 regulation of radial pattern formation IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:1901672 positive regulation of systemic acquired resistance IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP HCCA
BP GO:2000028 regulation of photoperiodism, flowering IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 74 223
No external refs found!