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AT5G20450


Description : CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast hits to 1458 proteins in 355 species: Archae - 28; Bacteria - 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses - 3; Other Eukaryotes - 412 (source: NCBI BLink).


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20450

Target Alias Description ECC score Gene Family Method Actions
AT1G04600 XIA, ATXIA myosin XI A 0.04 OrthoFinder output from all 47 species
Adi_g051494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14850 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Aop_g13990 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene61632.t1 ATXIK, XI-17,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011224 ATVIIIA, VIIIA not classified & original description: CDS=656-2908 0.03 OrthoFinder output from all 47 species
Dac_g05786 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Ehy_g19234 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
GSVIVT01005233001 XIA, ATXIA Myosin-6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_06923 ATM1 Myosin-1 OS=Arabidopsis thaliana (sp|q9lhe9|myo1_arath : 181.0) 0.03 OrthoFinder output from all 47 species
Pnu_g04456 ATXIE, XIE not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13852 XIF, ATMYO5, ATXIF not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25578 No alias class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Solyc10g006820.4.1 ATMYOS1, ATM4,... class VIII myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA

No InterPro domains available for this sequence

No external refs found!