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  5. AT5G20220

AT5G20220


Description : zinc knuckle (CCHC-type) family protein


Gene families : OG0007858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20220

Target Alias Description ECC score Gene Family Method Actions
Ceric.06G003700.1 Ceric.06G003700 not classified & original description: pacid=50620472... 0.05 OrthoFinder output from all 47 species
Dac_g31054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_41095 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g51710.1 LOC_Os01g51710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g09649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028179_P004 Zm00001e028179 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
MF GO:0015101 organic cation transmembrane transporter activity IEP HCCA
MF GO:0015234 thiamine transmembrane transporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
MF GO:0015651 quaternary ammonium group transmembrane transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
BP GO:0015697 quaternary ammonium group transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015888 thiamine transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0030076 light-harvesting complex IEP HCCA
BP GO:0030974 thiamine pyrophosphate transmembrane transport IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0035461 vitamin transmembrane transport IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0045117 azole transmembrane transport IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051180 vitamin transport IEP HCCA
BP GO:0071934 thiamine transmembrane transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:0072531 pyrimidine-containing compound transmembrane transport IEP HCCA
MF GO:0090422 thiamine pyrophosphate transmembrane transporter activity IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901474 azole transmembrane transporter activity IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!