AT5G20100

Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Gene families : OG0010922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010922_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G20100
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os05g08390.1	LOC_Os05g08390	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	ND	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan

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Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
CC	GO:0090406	pollen tube	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR031421	DUF4666	2	101

External Links

No external refs found!

AT5G20100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation