AT5G17880 (CSA1)

Aliases : CSA1

Description : disease resistance protein (TIR-NBS-LRR class)

Gene families : OG0013887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013887_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G17880

Target	Alias	Description	ECC score	Gene Family Method
AT2G17060	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.07	OrthoFinder output from all 47 species
AT4G19510	No alias	Disease resistance protein (TIR-NBS-LRR class)	0.08	OrthoFinder output from all 47 species
AT5G44870	LAZ5	Disease resistance protein (TIR-NBS-LRR class) family	0.14	OrthoFinder output from all 47 species
AT5G45230	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IMP	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0010114	response to red light	IMP	Interproscan
BP	GO:0042742	defense response to bacterium	IMP	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004407	histone deacetylase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0019213	deacetylase activity	IEP	HCCA
MF	GO:0033558	protein lysine deacetylase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	18	185
IPR011713	Leu-rich_rpt_3	638	657
IPR002182	NB-ARC	211	432

External Links

No external refs found!