AT5G17580

Description : Phototropic-responsive NPH3 family protein

Gene families : OG0025637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0025637_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G17580
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc01g081140.1.1	Solyc01g081140	BTB/POZ domain-containing protein At5g17580...	0.07	OrthoFinder output from all 47 species
Solyc06g073480.3.1	Solyc06g073480	BTB/POZ domain-containing protein At5g17580...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0004871	obsolete signal transducer activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	ISS	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
MF	GO:0015089	high-affinity copper ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000210	BTB/POZ_dom	6	91
IPR027356	NPH3_dom	180	416

External Links

No external refs found!