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  5. AT5G17523

AT5G17523


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: root cap 1 (RCP1) (TAIR:AT5G17520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0002666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002666_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G17523

Target Alias Description ECC score Gene Family Method Actions
Msp_g19983 MEX1, RCP1 maltose transporter *(MEX) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g09275 MEX1, RCP1 maltose transporter *(MEX) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14936 MEX1, RCP1 maltose transporter *(MEX) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!