AT5G16820 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)


Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : heat shock factor 3


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G16820
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Aev_g28626 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MpVg00470.1 HSFA1B, ATHSF3,... No annotation 0.03 OrthoFinder output from all 47 species
Zm00001e000890_P002 ATHSF1, HSF1,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity IMP Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009408 response to heat IMP Interproscan
BP GO:0009408 response to heat IEP Interproscan
BP GO:0009408 response to heat RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 28 117
No external refs found!