1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G16460

AT5G16460


Description : Putative adipose-regulatory protein (Seipin)


Gene families : OG0002303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002303_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G16460
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Aop_g18070 No alias lipid droplet biogenesis factor *(SEIPIN) & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G005100.1 Ceric.14G005100 lipid droplet biogenesis factor *(SEIPIN) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019108001 No alias Lipid metabolism.lipid bodies-associated... 0.07 OrthoFinder output from all 47 species
Gb_35862 No alias lipid droplet biogenesis factor (SEIPIN) 0.03 OrthoFinder output from all 47 species
LOC_Os12g05330.1 LOC_Os12g05330 lipid droplet biogenesis factor (SEIPIN) 0.03 OrthoFinder output from all 47 species
Pir_g64472 No alias lipid droplet biogenesis factor *(SEIPIN) & original... 0.02 OrthoFinder output from all 47 species
Solyc04g056380.3.1 Solyc04g056380 lipid droplet biogenesis factor (SEIPIN) 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
MF GO:0003845 11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity IEP HCCA
MF GO:0004303 estradiol 17-beta-dehydrogenase activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006108 malate metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0031407 oxylipin metabolic process IEP HCCA
BP GO:0031408 oxylipin biosynthetic process IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0042807 central vacuole IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050898 nitrile metabolic process IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0070524 11-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP HCCA
MF GO:0071614 linoleic acid epoxygenase activity IEP HCCA
MF GO:0072555 17-beta-ketosteroid reductase activity IEP HCCA
MF GO:0072582 17-beta-hydroxysteroid dehydrogenase (NADP+) activity IEP HCCA
BP GO:0080028 nitrile biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009617 Seipin 104 299
No external refs found!