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  5. AT5G16300

AT5G16300


Description : Vps51/Vps67 family (components of vesicular transport) protein


Gene families : OG0004240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G16300
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Adi_g057708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02673 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.06 OrthoFinder output from all 47 species
Aob_g02385 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Azfi_s0087.g042398 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.12 OrthoFinder output from all 47 species
Ceric.21G088700.1 Ceric.21G088700 component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001094.27 No alias Vesicle trafficking.target membrane tethering.COG... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001094.28 No alias Vesicle trafficking.target membrane tethering.COG... 0.02 OrthoFinder output from all 47 species
Cre14.g628050 No alias Vesicle trafficking.target membrane tethering.COG... 0.04 OrthoFinder output from all 47 species
Dcu_g02003 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.1 OrthoFinder output from all 47 species
Dde_g09510 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
GSVIVT01006267001 No alias Vesicle trafficking.target membrane tethering.COG... 0.17 OrthoFinder output from all 47 species
LOC_Os01g56910.1 LOC_Os01g56910 component COG1 of COG (Conserved-Oligomeric Golgi) complex 0.1 OrthoFinder output from all 47 species
Len_g55635 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.06 OrthoFinder output from all 47 species
Lfl_g04266 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.11 OrthoFinder output from all 47 species
MA_10321604g0010 No alias component COG1 of COG (Conserved-Oligomeric Golgi) complex 0.07 OrthoFinder output from all 47 species
MA_51620g0010 No alias component COG1 of COG (Conserved-Oligomeric Golgi) complex 0.05 OrthoFinder output from all 47 species
Mp3g08300.1 No alias component COG1 of COG (Conserved-Oligomeric Golgi) complex 0.08 OrthoFinder output from all 47 species
Nbi_g01475 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.06 OrthoFinder output from all 47 species
Ore_g15164 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Ppi_g05943 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Sam_g18672 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Solyc03g120700.3.1 Solyc03g120700 component COG1 of COG (Conserved-Oligomeric Golgi) complex 0.11 OrthoFinder output from all 47 species
Spa_g26210 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Tin_g02174 No alias component *(COG1) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Zm00001e019646_P001 Zm00001e019646 component COG1 of COG (Conserved-Oligomeric Golgi) complex 0.13 OrthoFinder output from all 47 species
Zm00001e028959_P001 Zm00001e028959 component COG1 of COG (Conserved-Oligomeric Golgi) complex 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
BP GO:0016926 protein desumoylation RCA Interproscan
BP GO:0050665 hydrogen peroxide biosynthetic process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0001709 cell fate determination IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005884 actin filament IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006409 tRNA export from nucleus IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0030042 actin filament depolymerization IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
CC GO:0030658 transport vesicle membrane IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
CC GO:0030660 Golgi-associated vesicle membrane IEP HCCA
CC GO:0030662 coated vesicle membrane IEP HCCA
CC GO:0030665 clathrin-coated vesicle membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048867 stem cell fate determination IEP HCCA
BP GO:0051014 actin filament severing IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051031 tRNA transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051261 protein depolymerization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051764 actin crosslink formation IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0097064 ncRNA export from nucleus IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!