AT5G15650 (RGP2, ATRGP2)

Aliases : RGP2, ATRGP2

Description : reversibly glycosylated polypeptide 2

Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G15650

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00209120	ATRGP1, RGP1,...	Carbohydrate metabolism.nucleotide sugar...	0.06	OrthoFinder output from all 47 species
Aev_g40610	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g06621	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g12669	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g12775	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g38503	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0110.g045465	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: CDS=87-1109	0.04	OrthoFinder output from all 47 species
Ceric.02G101600.1	ATRGP1, RGP1,...	UDP-L-arabinose mutase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.33G002800.1	ATRGP1, RGP1,...	UDP-L-arabinose mutase & original description:...	0.03	OrthoFinder output from all 47 species
Cre13.g565800	ATRGP1, RGP1	Carbohydrate metabolism.nucleotide sugar...	0.03	OrthoFinder output from all 47 species
Dac_g27726	RGP3, RGP	UDP-L-arabinose mutase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07439	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.08	OrthoFinder output from all 47 species
LOC_Os03g40270.1	RGP2, ATRGP2,...	UDP-L-arabinose mutase	0.04	OrthoFinder output from all 47 species
LOC_Os04g56520.2	LOC_Os04g56520	UDP-L-arabinose mutase	0.06	OrthoFinder output from all 47 species
MA_6359g0010	RGP3, RGP	UDP-L-arabinose mutase	0.05	OrthoFinder output from all 47 species
Mp2g10790.1	RGP3, RGP	UDP-L-arabinose mutase	0.04	OrthoFinder output from all 47 species
Mp2g10800.1	ATRGP1, RGP1	UDP-L-arabinose mutase	0.06	OrthoFinder output from all 47 species
Msp_g01532	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g18828	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g18722	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g18723	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g01554	RGP3, RGP	UDP-L-arabinose mutase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g15549	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013218	ATRGP1, RGP1	UDP-L-arabinose mutase & original description: CDS=186-1241	0.02	OrthoFinder output from all 47 species
Sam_g16092	No alias	UDP-L-arabinose mutase & original description: none	0.03	OrthoFinder output from all 47 species
Smo140071	ATRGP1, RGP1	Carbohydrate metabolism.nucleotide sugar...	0.05	OrthoFinder output from all 47 species
Smo76446	RGP2, ATRGP2	Carbohydrate metabolism.nucleotide sugar...	0.03	OrthoFinder output from all 47 species
Solyc03g070390.3.1	ATRGP1, RGP1,...	UDP-L-arabinose mutase	0.02	OrthoFinder output from all 47 species
Solyc04g005340.2.1	ATRGP1, RGP1,...	UDP-L-arabinose mutase	0.05	OrthoFinder output from all 47 species
Tin_g40978	RGP3, RGP	UDP-L-arabinose mutase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e012459_P003	RGP2, ATRGP2,...	UDP-L-arabinose mutase	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005840	ribosome	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	None	Extended
CC	GO:0022626	cytosolic ribosome	IDA	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0033356	UDP-L-arabinose metabolic process	IMP	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0052691	UDP-arabinopyranose mutase activity	IDA	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0009968	negative regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010648	negative regulation of cell communication	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0023057	negative regulation of signaling	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR037595	RGP_fam	18	352

External Links

No external refs found!

AT5G15650 (RGP2, ATRGP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation