AT5G15300

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG0030434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0030434_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G15300

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01011444001	No alias	Pentatricopeptide repeat-containing protein At5g15300...	0.03	OrthoFinder output from all 47 species
LOC_Os03g07234.1	LOC_Os03g07234	Pentatricopeptide repeat-containing protein At5g15300...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	75	124
IPR002885	Pentatricopeptide_repeat	238	286
IPR002885	Pentatricopeptide_repeat	317	344
IPR002885	Pentatricopeptide_repeat	419	443
IPR002885	Pentatricopeptide_repeat	381	408
IPR002885	Pentatricopeptide_repeat	179	205

External Links

No external refs found!