AT5G13380

Description : Auxin-responsive GH3 family protein

Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G13380

Target	Alias	Description	ECC score	Gene Family Method
AT1G23160	No alias	Auxin-responsive GH3 family protein	0.04	OrthoFinder output from all 47 species
AT1G28130	GH3.17	Auxin-responsive GH3 family protein	0.07	OrthoFinder output from all 47 species
AT2G23170	GH3.3	Auxin-responsive GH3 family protein	0.05	OrthoFinder output from all 47 species
AT5G13320	GH3.12, PBS3, WIN3, GDG1	Auxin-responsive GH3 family protein	0.04	OrthoFinder output from all 47 species
AT5G54510	DFL1, GH3.6	Auxin-responsive GH3 family protein	0.04	OrthoFinder output from all 47 species
Adi_g102139	DFL1, GH3.6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g09018	GH3.5, WES1	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.02	OrthoFinder output from all 47 species
Ala_g24399	GH3.5, WES1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g32269	GH3.5, WES1	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene00427.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene06626.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene06627.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene31859.t1	GH3.5, WES1,...	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.02	OrthoFinder output from all 47 species
Ceric.08G060800.1	DFL1, GH3.6,...	not classified & original description: pacid=50637832...	0.03	OrthoFinder output from all 47 species
Dac_g13963	GH3.5, WES1	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.02	OrthoFinder output from all 47 species
Dac_g44438	GH3.1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01027971001	GH3.9	Putative indole-3-acetic acid-amido synthetase GH3.9...	0.07	OrthoFinder output from all 47 species
Gb_04369	No alias	indole-3-acetic acid-amido synthetase	0.05	OrthoFinder output from all 47 species
Gb_06148	GH3.17	Indole-3-acetic acid-amido synthetase GH3.17...	0.02	OrthoFinder output from all 47 species
Gb_36596	GH3.17	Indole-3-acetic acid-amido synthetase GH3.17...	0.06	OrthoFinder output from all 47 species
LOC_Os11g32510.1	GH3.17, LOC_Os11g32510	Indole-3-acetic acid-amido synthetase GH3.17...	0.04	OrthoFinder output from all 47 species
LOC_Os11g32520.1	GH3.17, LOC_Os11g32520	Probable indole-3-acetic acid-amido synthetase GH3.13...	0.02	OrthoFinder output from all 47 species
Len_g13540	DFL1, GH3.6	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.02	OrthoFinder output from all 47 species
Len_g59625	DFL1, GH3.6	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g39621	GH3.5, WES1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10434772g0010	DFL1, GH3.6	indole-3-acetic acid-amido synthetase	0.03	OrthoFinder output from all 47 species
MA_393345g0010	DFL1, GH3.6	Probable indole-3-acetic acid-amido synthetase GH3.1...	0.03	OrthoFinder output from all 47 species
MA_580596g0010	DFL1, GH3.6	Indole-3-acetic acid-amido synthetase GH3.6...	0.02	OrthoFinder output from all 47 species
Mp6g07600.1	DFL1, GH3.6	Probable indole-3-acetic acid-amido synthetase GH3.8...	0.02	OrthoFinder output from all 47 species
Msp_g37634	DFL1, GH3.6	indole-3-acetic acid-amido synthetase *(GH3) & original...	0.04	OrthoFinder output from all 47 species
Ore_g11120	GH3.5, WES1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g58146	GH3.1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g005310.2.1	DFL1, GH3.6,...	indole-3-acetic acid-amido synthetase	0.02	OrthoFinder output from all 47 species
Spa_g04008	GH3.5, WES1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g04100	GH3.17	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g08993	GH3.5, WES1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e011159_P002	GH3.17, Zm00001e011159	Indole-3-acetic acid-amido synthetase GH3.17...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010208	pollen wall assembly	None	Extended
BP	GO:0010584	pollen exine formation	RCA	Interproscan
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
MF	GO:0005319	lipid transporter activity	IEP	HCCA
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	HCCA
MF	GO:0005372	water transmembrane transporter activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005788	endoplasmic reticulum lumen	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IEP	HCCA
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	HCCA
MF	GO:0015250	water channel activity	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
BP	GO:0035445	borate transmembrane transport	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0046713	borate transport	IEP	HCCA
MF	GO:0046715	active borate transmembrane transporter activity	IEP	HCCA
BP	GO:0048235	pollen sperm cell differentiation	IEP	HCCA
BP	GO:0048859	formation of anatomical boundary	IEP	HCCA
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	HCCA
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	HCCA
MF	GO:0080072	spermidine:sinapoyl CoA N-acyltransferase activity	IEP	HCCA
MF	GO:0080073	spermidine:coumaroyl CoA N-acyltransferase activity	IEP	HCCA
MF	GO:0080074	spermidine:caffeoyl CoA N-acyltransferase activity	IEP	HCCA
MF	GO:0080075	spermidine:feruloyl CoA N-acyltransferase activity	IEP	HCCA
BP	GO:0080088	spermidine hydroxycinnamate conjugate biosynthetic process	IEP	HCCA
BP	GO:0090691	formation of plant organ boundary	IEP	HCCA
BP	GO:1900150	regulation of defense response to fungus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004993	GH3	47	593

External Links

No external refs found!

AT5G13380

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation