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  5. AT5G13130

AT5G13130


Description : Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein


Gene families : OG0000549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G13130
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Adi_g059405 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Aev_g44214 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Aob_g18611 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Cba_g02069 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Cba_g03401 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.03 OrthoFinder output from all 47 species
Dcu_g09688 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Ehy_g04048 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.03 OrthoFinder output from all 47 species
Gb_17013 No alias MORC-type auxiliary factor of DNA methylation pathway 0.02 OrthoFinder output from all 47 species
LOC_Os02g27000.1 LOC_Os02g27000 MORC-type auxiliary factor of DNA methylation pathway 0.03 OrthoFinder output from all 47 species
LOC_Os10g10190.1 CRT1, LOC_Os10g10190 MORC-type auxiliary factor of DNA methylation pathway 0.03 OrthoFinder output from all 47 species
LOC_Os11g26830.1 LOC_Os11g26830 MORC-type auxiliary factor of DNA methylation pathway 0.02 OrthoFinder output from all 47 species
Lfl_g04967 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Nbi_g04416 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Ppi_g10228 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Ppi_g15770 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Ppi_g43108 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023705 No alias not classified & original description: CDS=1-1920 0.02 OrthoFinder output from all 47 species
Sam_g16289 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Zm00001e024729_P003 Zm00001e024729 MORC-type auxiliary factor of DNA methylation pathway 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
CC GO:0008278 cohesin complex IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0010032 meiotic chromosome condensation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0051177 meiotic sister chromatid cohesion IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation IEP HCCA
BP GO:0051455 monopolar spindle attachment to meiosis I kinetochore IEP HCCA
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IEP HCCA
BP GO:0070601 centromeric sister chromatid cohesion IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!