AT5G13120 (ATCYP20-2, CYP20-2)

Aliases : ATCYP20-2, CYP20-2

Description : cyclophilin 20-2

Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G13120

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00225920	ATCYP20-2,...	Protein modification.protein folding and quality...	0.04	OrthoFinder output from all 47 species
AMTR_s00045p00158000	ROC4,...	Protein modification.protein folding and quality...	0.03	OrthoFinder output from all 47 species
Cba_g12958	ATCYP20-2, CYP20-2	EC_5.2 cis-trans-isomerase & original description: none	0.04	OrthoFinder output from all 47 species
Cre06.g284900	CYP5, ATCYP5, CYP19-4	Protein modification.protein folding and quality...	0.02	OrthoFinder output from all 47 species
Cre13.g588100	ROC2	Protein modification.protein folding and quality...	0.03	OrthoFinder output from all 47 species
Dcu_g04517	ATCYP20-2, CYP20-2	EC_5.2 cis-trans-isomerase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g46626	ATCYP20-2, CYP20-2	EC_5.2 cis-trans-isomerase & original description: none	0.08	OrthoFinder output from all 47 species
Dde_g11262	No alias	EC_5.2 cis-trans-isomerase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01000919001	ATCYP20-2, CYP20-2	Protein modification.protein folding and quality...	0.08	OrthoFinder output from all 47 species
GSVIVT01028226001	ROC4	Protein modification.protein folding and quality...	0.12	OrthoFinder output from all 47 species
Gb_11317	ATCYP20-2, CYP20-2	component PnsL5 of NDH lumen subcomplex L. protein...	0.07	OrthoFinder output from all 47 species
LOC_Os01g18210.1	ROC4, LOC_Os01g18210	protein folding catalyst	0.04	OrthoFinder output from all 47 species
LOC_Os05g01270.1	ATCYP20-2,...	component PnsL5 of NDH lumen subcomplex L. protein...	0.11	OrthoFinder output from all 47 species
Mp7g15930.1	ATCYP20-2, CYP20-2	component PnsL5 of NDH lumen subcomplex L. protein...	0.09	OrthoFinder output from all 47 species
Pp3c24_9660V3.1	ATCYP20-2,...	cyclophilin 20-2	0.03	OrthoFinder output from all 47 species
Ppi_g22050	ATCYP20-2, CYP20-2	EC_5.2 cis-trans-isomerase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15124	No alias	EC_5.2 cis-trans-isomerase & original description: none	0.06	OrthoFinder output from all 47 species
Solyc01g009990.3.1	ATCYP20-2,...	component PnsL5 of NDH lumen subcomplex L. protein...	0.12	OrthoFinder output from all 47 species
Spa_g10055	ATCYP20-2, CYP20-2	EC_5.2 cis-trans-isomerase & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g14689	ATCYP20-2, CYP20-2	EC_5.2 cis-trans-isomerase & original description: none	0.09	OrthoFinder output from all 47 species
Zm00001e027678_P001	ATCYP20-2,...	component PnsL5 of NDH lumen subcomplex L. protein...	0.07	OrthoFinder output from all 47 species
Zm00001e029710_P001	ATCYP20-2,...	component PnsL5 of NDH lumen subcomplex L. protein...	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IMP	Interproscan
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	ISS	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006457	protein folding	ISS	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009533	chloroplast stromal thylakoid	IDA	Interproscan
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009543	chloroplast thylakoid lumen	IDA	Interproscan
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010275	NAD(P)H dehydrogenase complex assembly	IMP	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0019344	cysteine biosynthetic process	RCA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031977	thylakoid lumen	IDA	Interproscan
CC	GO:0031978	plastid thylakoid lumen	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
MF	GO:0043424	protein histidine kinase binding	IPI	Interproscan
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042816	vitamin B6 metabolic process	IEP	HCCA
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002130	Cyclophilin-type_PPIase_dom	106	252

External Links

No external refs found!

AT5G13120 (ATCYP20-2, CYP20-2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation