AT5G13000 (gsl12, ATGSL12)


Aliases : gsl12, ATGSL12

Description : glucan synthase-like 12


Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G13000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00098420 gsl12, ATGSL12,... Cell wall.callose.callose synthase 0.05 OrthoFinder output from all 47 species
AT1G06490 GSL7, ATGSL07,... glucan synthase-like 7 0.05 OrthoFinder output from all 47 species
Adi_g011962 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016429 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33737 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08124 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21799 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33955.t1 gsl12, ATGSL12,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0159.g053976 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: CDS=621-5987 0.03 OrthoFinder output from all 47 species
Azfi_s0175.g055987 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: CDS=244-5988 0.05 OrthoFinder output from all 47 species
Ceric.32G064600.1 gsl12, ATGSL12,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15078 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17127 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22330 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40022 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05969 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007560001 ATGSL08, ATGSL8,... Cell wall.callose.callose synthase 0.05 OrthoFinder output from all 47 species
GSVIVT01020548001 GSL5, PMR4,... Cell wall.callose.callose synthase 0.04 OrthoFinder output from all 47 species
GSVIVT01025370001 ATGSL10, gsl10, CALS9 Cell wall.callose.callose synthase 0.04 OrthoFinder output from all 47 species
Gb_01752 ATGSL10, gsl10, CALS9 callose synthase 0.03 OrthoFinder output from all 47 species
Gb_06219 gsl12, ATGSL12 callose synthase 0.04 OrthoFinder output from all 47 species
Gb_37962 GSL5, PMR4,... callose synthase 0.03 OrthoFinder output from all 47 species
LOC_Os06g51270.1 gsl12, ATGSL12,... callose synthase 0.05 OrthoFinder output from all 47 species
Lfl_g05756 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_229544g0010 gsl12, ATGSL12 callose synthase 0.03 OrthoFinder output from all 47 species
MA_377758g0010 GSL5, PMR4,... callose synthase 0.03 OrthoFinder output from all 47 species
MA_913073g0010 gsl12, ATGSL12 Callose synthase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g24830.1 GLS2, ATGSL02, CALS5 callose synthase 0.05 OrthoFinder output from all 47 species
Msp_g13515 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43330 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13514 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25483 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13350 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022899 ATGSL01, GSL01,... EC_2.4 glycosyltransferase & original description: CDS=1-5406 0.04 OrthoFinder output from all 47 species
Sam_g50125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo163802 GLS2, ATGSL02, CALS5 Cell wall.callose.callose synthase 0.03 OrthoFinder output from all 47 species
Smo267830 GLS2, ATGSL02, CALS5 Cell wall.callose.callose synthase 0.03 OrthoFinder output from all 47 species
Smo439692 GSL5, PMR4,... Cell wall.callose.callose synthase 0.03 OrthoFinder output from all 47 species
Solyc01g006370.3.1 gsl12, ATGSL12,... callose synthase 0.04 OrthoFinder output from all 47 species
Solyc02g078230.2.1 ATGSL01, GSL01,... callose synthase 0.05 OrthoFinder output from all 47 species
Spa_g30298 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39785 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51863 ATGSL01, GSL01,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013335_P001 gsl12, ATGSL12,... callose synthase 0.07 OrthoFinder output from all 47 species
Zm00001e030137_P001 gsl12, ATGSL12,... callose synthase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex ISS Interproscan
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0003843 1,3-beta-D-glucan synthase activity ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process ISS Interproscan
BP GO:0006346 DNA methylation-dependent heterochromatin formation RCA Interproscan
BP GO:0007267 cell-cell signaling RCA Interproscan
BP GO:0009556 microsporogenesis RCA Interproscan
BP GO:0009616 RNAi-mediated antiviral immune response RCA Interproscan
BP GO:0010267 ta-siRNA processing RCA Interproscan
MF GO:0016757 glycosyltransferase activity ISS Interproscan
BP GO:0031048 RNA-mediated heterochromatin formation RCA Interproscan
BP GO:0035196 miRNA processing RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
BP GO:0052543 callose deposition in cell wall RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000076 DNA replication checkpoint signaling IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005658 alpha DNA polymerase:primase complex IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006271 DNA strand elongation involved in DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010586 miRNA metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022616 DNA strand elongation IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031209 SCAR complex IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0035019 somatic stem cell population maintenance IEP HCCA
MF GO:0035198 miRNA binding IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051301 cell division IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0070971 endoplasmic reticulum exit site IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902183 regulation of shoot apical meristem development IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR003440 Glyco_trans_48 1148 1847
IPR026899 FKS1-like_dom1 322 434
IPR039431 Vta1/CALS_N 45 173
No external refs found!