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  5. AT5G12900

AT5G12900


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0004046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G12900

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00096700 evm_27.TU.AmTr_v1... IRK-interacting protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g102447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g14500.1 LOC_Os03g14500 IRK-interacting protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g18680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010207 No alias not classified & original description: CDS=648-3506 0.02 OrthoFinder output from all 47 species
Zm00001e010062_P001 Zm00001e010062 IRK-interacting protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024380_P001 Zm00001e024380 IRK-interacting protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0005768 endosome IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA

No InterPro domains available for this sequence

No external refs found!